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import networkx as nx
import math
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G = nx.powerlaw_cluster_graph(n=100, m=1, p=0.3)
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G = nx.barbell_graph(10,2)
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from IPython.core.display import display_javascript
import json
from networkx.readwrite import json_graph
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d = json_graph.node_link_data(G)
json.dump(d, open('graph.json','w'))
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%%html
<div id="d3-example"></div>
<style>
.node {stroke: #fff; stroke-width: 1.5px;}
.link {stroke: #999; stroke-opacity: .6;}
</style>
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%%javascript
// We load the d3.js library from the Web.
require.config({paths: {d3: "http://d3js.org/d3.v3.min"}});
require(["d3"], function(d3) {
// The code in this block is executed when the
// d3.js library has been loaded.
// First, we specify the size of the canvas containing
// the visualization (size of the <div> element).
var width = 600,
height = 600;
// We create a color scale.
var color = d3.scale.category20();
// We create a force-directed dynamic graph layout.
var force = d3.layout.force()
.charge(-60)
.linkDistance(30)
.linkStrength(0.7)
.gravity(0.35)
.theta(0.95)
.size([width, height]);
// In the <div> element, we create a <svg> graphic
// that will contain our interactive visualization.
var svg = d3.select("#d3-example").select("svg")
if (svg.empty()) {
svg = d3.select("#d3-example").append("svg")
.attr("width", width)
.attr("height", height);
}
// We load the JSON file.
d3.json("graph.json", function(error, graph) {
// In this block, the file has been loaded
// and the 'graph' object contains our graph.
// We load the nodes and links in the force-directed
// graph.
force.nodes(graph.nodes)
.links(graph.links)
.start();
// We create a <line> SVG element for each link
// in the graph.
var link = svg.selectAll(".link")
.data(graph.links)
.enter().append("line")
.attr("class", "link");
//.style("stroke-width", function(d) { return Math.sqrt(d.value); });
// We create a <circle> SVG element for each node
// in the graph, and we specify a few attributes.
var node = svg.selectAll(".node")
.data(graph.nodes)
.enter().append("circle")
.attr("class", "node")
.attr("r", 5)
.style("fill", color(1))
.call(force.drag);
// The name of each node is the node number.
node.append("title")
.text(function(d) { return d.name; });
// We bind the positions of the SVG elements
// to the positions of the dynamic force-directed graph,
// at each time step.
force.on("tick", function() {
link.attr("x1", function(d) { return d.source.x; })
.attr("y1", function(d) { return d.source.y; })
.attr("x2", function(d) { return d.target.x; })
.attr("y2", function(d) { return d.target.y; });
node.attr("cx", function(d) { return d.x; })
.attr("cy", function(d) { return d.y; });
});
});
});
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